Retrotransposons from Arachis ipaensis, a B-genome species of wild peanut

来源 :The Sixth International Conference of the Peanut Research Co | 被引量 : 0次 | 上传用户：lso_oo00

【摘要】

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【作者】

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BS Vidigal L Froenicke C Beitel D Scaglione IC Bacon R Michelmore DJ Bertioli

【机构】

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Universidade de Brasília,Brasília,DF,Brazil;Embrapa Recursos Genéticos e Biotecnologia,Brasília,DF,B

【出处】

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The Sixth International Conference of the Peanut Research Co

【发表日期】

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2013年4期

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This study reports an analysis of the repetitive component of the peanut B-genome starting from c.800Mbp of sequence from a preliminary gene-space assembly of Arachis ipaensis.In order to identify potential Long Terminal Repeat (LTR) retrotransposons we used an in-house pipeline that employs Perl scripts, LTR_finder, Cap3, Blast and Biolayout.Using representative members of each grouping, retrotranspoons were classified and annotated.

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Retrotransposons from Arachis ipaensis, a B-genome species of wild peanut

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