To meet the increasing need of fresh water and to improve the water quality of Taihu Lake, water transfer from the Yangtze River was initiated in 2002. This study was performed to investigate the sediment distribution along the river course following water transfer. A rainfall-runoff model was first built to calculate the runoff of the Taihu Basin in 2003. Then, the flow patterns of river networks were simulated using a one-dimensional river network hydrodynamic model. Based on the boundary conditions of the flow in tributaries of the Wangyu River and the water level in Taihu Lake, a one-dimensional hydrodynamic and sediment transport numerical model of the Wangyu River was built to analyze the influences of the inflow rate of the water transfer and the suspended sediment concentration (SSC) of inflow on the sediment transport. The results show that the water transfer inflow rate and SSC of inflow have significant effects on the sediment distribution. The higher the inflow rate or SSC of inflow is, the higher the SSC value is at certain cross-sections along the river course of water transfer. Higher inflow rate and SSC of inflow contribute to higher sediment deposition per kilometer and sediment thickness. It is also concluded that a sharp decrease of the inflow velocity at the entrance of the Wangyu River on the river course of water transfer induces intense sedimentation at the cross-section near the Changshu hydro-junction. With an increasing distance from the Changshu hydro-junction, the sediment deposition and sedimentation thickness decrease gradually along the river course. To meet the increasing need of fresh water and to improve the water quality of Taihu Lake, water transfer from the Yangtze River was initiated in 2002. This study was performed to investigate the sediment distribution along the river course following water transfer. A rainfall-runoff model was first built to calculate the runoff of the Taihu Basin in 2003. Then, the flow patterns of river networks were simulated using a one-dimensional river network hydrodynamic model. Based on the boundary conditions of the flow in tributaries of the Wangyu River and the water level in Taihu Lake, a one-dimensional hydrodynamic and sediment transport numerical model of the Wangyu River was built to analyze the influences of the inflow rate of the water transfer and the suspended sediment concentration (SSC) of inflow on the sediment transport. The results show that the water transfer inflow rate and SSC of inflow have significant effects on the sediment distribution. The higher the inflow rate or SSC of inflow is, the higher the SSC of inflow contribute to higher sediment deposition per kilometer and sediment thickness. It is also said that a sharp decrease of the inflow velocity at the entrance of the Wangyu River on the river course of water transfer induces intense sedimentation at the cross-section near the Changshu hydro-junction. the sediment deposition and sedimentation thickness decrease gradually along the river course.