Design of a Two- and Three-input DNA Logic Gates Using Oligonucleotides Containing Fluorophore-Quenc

来源 :第八届全国微全分析系统学术会议、第三届全国微纳尺度生物分离分析学术会议暨第五届国际微化学与微系统学术会议 | 被引量 : 0次 | 上传用户:duaneking
下载到本地 , 更方便阅读
声明 : 本文档内容版权归属内容提供方 , 如果您对本文有版权争议 , 可与客服联系进行内容授权或下架
论文部分内容阅读
  We reported the development of two- and three-input logic devices based on the fact that Hg2+-,Ag+-,and/or coralyne can drive fluorescence quenching of oligonucleotide-based probe.The designed probe is a single-stranded oligonucleotide that contains a a carboxyfluorescein (FAM) at the 5-end and a 4-([4-(dimethylamino)phenoyl]azo)-benzoic acid (DABCYL) at the 3-end.Becuase a single-stranded oligonucleotide consists of a series of 58 random DNA bases (DNA58,GTC TCT GTG TGC GCC AGA GAA CAC TGG GGC AGA TAT GGG CCA GCA CAG AAT GAG GCC C),Hg2+-,Ag+-,and coralyne can force the conformation change of the DNA58 from a random coil to a folded structure via the coordination of thymine-Hg2+- thymine,cytosine-Ag+-cytosine,and adenosine2-coralyne-adenosine2,respectively.This conformational change induced direct contact between FAM and DABCYL,causing collisional quenching of fluorescence.The addition of thiol-containing molecules and chelating agents to a solution of the Hg2+-DNA58 complexes resulted in the restoration of the fluorescence of FAM.Similar fluorescence response was observed in the case of the Ag+-DNA58 complexes.Moreover,the fluorescence of the coralyne-DNA58 complexes lighted up in the presence of heparin.According to the abovementioned results,a set of logic gates involving two-input and three-input systems was demonstrated,including OR,AND,NOR,INH,IMPLICATION and three-input NOR gate.These results displays the higher order circuts for logic gate operation based on oligonucleotide-based probe.
其他文献
The complement fixation test (CFT) is a serological test that can be used to detect the presence of either specific antibody or antigen to diagnose infections, particularly with microbes that are not
会议
This study presents a study of the lenless CMOS (Complementary Metal-Oxide-Semiconductor) sensor integrating a NI LabVIEW image processing program for particles recognition and size analysis The micro
会议
We propose an all fiber apparatus based on a variable ratio fiber coupler which can transport micro particles controllably and trap particles one by one along a microfiber.The microfiber used in exper
会议
A small sphere in a shear flow experiences a lift force perpendicular to the flow direction due to the velocity gradient.The lift force is of great importance on various areas, including aerosol scien
会议
Induced pluripotent stem cell (iPSC) technology holds significant promise for regenerative medicine [1] and diagnostic [2] applications.As a testament to their versatility, iPSCs have been differentia
会议
Co-encapsulating microbead-supported gene libraries and single immune cells in microfluidic droplet followed by RT-PCR and next-generation sequencing is an emerging strategy to extract functional gene
会议
Genetic alternations can serve as highly specific biomarkers to distinguish fatal bacteria or cancer cells from their normal counterparts.However,these mutations normally exist in very rare amount in
Laser-induce fluorescence (LIF) is a sensitive and widely used detection method for capillary electrophoresis (CE).Laser diode is an ideal light source for miniaturized LIF detector due to its small s
Carbon based nanomaterials such as carbon nanotube (CNT) and carbon nanofiber (CNF) [1] have been studied for application to fuel cells,capacitors and various biosensors.We have greatly improved the d
Objectives: Squamous cell carcinoma (SCC) and salivary gland adenoid cystic carcinoma (ACC) are two common malignancies in the oral and maxilla-facial region[1,2].It has been proved that angiogenesis