Combined Docking QM/MM interaction,and MD Simulation for Agonist Mechanisms of Silent a7 Nicotinic A

来源 :第十三届全国量子化学会议 | 被引量 : 0次 | 上传用户:aji_y
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  Potentiation of the function of the α7 nicotinic acet ylcholine receptor(a7-nAChR)is believed to provide a possible way for the treatment of cholinergic s ystem dysfunctions such as schizophrenia and Alzheimer s disease.Partial agonists of α7-nAChR are able to selectively induce desensitized states of the receptor.In this study,the binding profiles of 4 silent agonists with a chimera structure constructed from the extracellular domain of α7-nAChR and an acetylcholine binding protein was investigated with molecular docking,QM/MM method,molecular dynamics simulation and free energy calculation methods.We found that several residues were used to recognize the ligand,as well as a series residues to determine the activity.The result from this study disclose the binding mechanism and agonist mechanism of α7-nAChR and structural modifications required to improve the selectivity.
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