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Many important traits in apple are under polygenic control.Saturated and high-density genetic linkage maps are useful for apple genetic research and it is essential for a QTL fine mapping.In this work, 217 F1 individuals crossed between Golden Delicious as the maternal parent and Fuji as the pollen parent were used to construct the linkage maps.Adopted SLAF-seq, which is independent development by Biomarker Technologies Corporation to develop the SNPs.